preprocessCore - A collection of pre-processing functions
A library of core preprocessing routines.
Last updated 24 days ago
infrastructure
12.00 score 17 stars 214 packages 1.8k scripts 21k downloadsaffyio - Tools for parsing Affymetrix data files
Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
Last updated 24 days ago
microarraydataimportinfrastructure
7.94 score 3 stars 115 packages 42 scripts 11k downloadsaffyPLM - Methods for fitting probe-level models
A package that extends and improves the functionality of the base affy package. Routines that make heavy use of compiled code for speed. Central focus is on implementation of methods for fitting probe-level models and tools using these models. PLM based quality assessment tools.
Last updated 24 days ago
microarrayonechannelpreprocessingqualitycontrol
5.77 score 4 packages 204 scripts 2.0k downloadsBufferedMatrix - A matrix data storage object held in temporary files
A tabular style data object where most data is stored outside main memory. A buffer is used to speed up access to data.
Last updated 24 days ago
infrastructure
4.56 score 1 packages 6 scripts 254 downloadsBufferedMatrixMethods - Microarray Data related methods that utlize BufferedMatrix objects
Microarray analysis methods that use BufferedMatrix objects
Last updated 24 days ago
infrastructure
2.30 score 277 downloads